KOBAS 2.0 |

Annotate+Identify

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We are sorry that kobas 2.0 is out of work, and this page may be helpful temporarily.
We will update kobas to version 3.0 as soon as possible.


Input input type:

species:

Input
protein
sequences in FASTA format:
example

Or upload a file:

Database
Select your desired databases:
(Note: the Corrected P-Values will be affected by the number of selected databases)
KEGG PATHWAY
Reactome BioCyc PANTHER
OMIM KEGG DISEASE
NHGRI GWAS Catalog
Gene Ontology

Background Now we only support using the whole genome of the species you have choosen as the background because the annotate function isn't online. We are sorry and it will be fixed soon!
Please input Annotate output as the background or leave it blank then we will use the whole genome as default background:

Or upload a file:

Options for statistics
Statistical method:
For hypergeometric test / Fisher's exact test and chi-square test, foreground must be a subset of background. For chi-square test, if sample size is less than 5, Fisher's exact test is used. For frequency list, no background is needed.
FDR correction method:
Small term cutoff:
Use KO to do orthologous analysis between different species?(This may take a long time.)